hpc-runtime-doctor agent skill by HeshamFS
Diagnoses HPC runtime and scheduler problems for already-submitted materials simulation jobs that failed, ran slowly, were killed, or behaved differently on a cluster.
At a glance
| Publisher | HeshamFS |
|---|---|
| Repository | HeshamFS/materials-simulation-skills (24 listed skills) |
| Category | Science and Research |
| License | Apache-2.0 |
| Last commit | June 25, 2026 (repository) |
| SKILL.md | 154 lines, 1,242 words |
| Bundled files | 5 files, including references, scripts |
| Quality score | 85/100 · B Passes all seven graded checks |
| Security scan | Not scanned |
| README badge | Get the badges for this listing |
Before you install
Read from the skill's files at the directory's October 19, 2026 snapshot: what ships with it, what its code reads, and the terms it is published under.
- Bundled scripts: 1 script file (1 Python). Your agent may run them, so read them first.
- Tool permissions requested:
Read, Bash, Write, Grep, Glob(theallowed-toolsfield of SKILL.md). - License: Apache-2.0, an open-source or open-content license.
Install hpc-runtime-doctor
The skills CLI works with Claude Code, Codex, Cursor and other agents; the other routes copy the folder by hand.
npx skills add https://github.com/HeshamFS/materials-simulation-skills/tree/main/skills/hpc-deployment/hpc-runtime-doctortmp="$(mktemp -d)"
git clone --depth 1 https://github.com/HeshamFS/materials-simulation-skills.git "$tmp/repo"
mkdir -p .claude/skills
cp -R "$tmp/repo/"skills/hpc-deployment/hpc-runtime-doctor .claude/skills/
rm -rf "$tmp"python3 ~/.codex/skills/.system/skill-installer/scripts/install-skill-from-github.py \
--repo HeshamFS/materials-simulation-skills \
--path skills/hpc-deployment/hpc-runtime-doctorHeshamFS/materials-simulation-skills is third-party code. Read SKILL.md and any bundled scripts before you install it.
How the author describes it
Diagnose HPC runtime and scheduler problems for materials simulations, including MPI/OpenMP/GPU layout, modules, CUDA/Kokkos hints, scratch paths, walltime, job arrays, restart strategy, scheduler portability, and resource mismatch. Use when an ALREADY-SUBMITTED job failed, ran slowly, got killed, or behaved differently on a cluster than on a workstation. To author or vet a NEW submission script before running, use slurm-job-script-generator instead.
From the description field of SKILL.md. Agents read this line to decide when to load the skill.
Sections in SKILL.md
- Goal
- Requirements
- Inputs to Gather
- Decision Guidance
- Script Outputs
- Workflow
- Error Handling
- Limitations
- Verification checklist
- Common pitfalls & rationalizations
- Security
- Input Validation
- File Access
- Tool Restrictions
- Safety Measures
- References
Files in the skill folder
CHANGELOG.mdSKILL.mdevals/evals.jsonreferences/hpc_runtime_patterns.mdscripts/hpc_runtime_doctor.py
Suede Skill Check: 85/100 · B
Report snapshot · · graded-v2
The rubric totals 100 points; published scores are capped at 99. Security scan: not scanned.
Source revision: fa1ce8de76b2. Report version 16cc27a1744e. Badge URLs follow the latest listing; save the report to keep this version.
Download report · Request a fresh review
What to review next
- Recent maintenance: 3 of 9 points. 9 for a repository commit within 30 days of the snapshot; 6 within 90; 3 within 180; 1 within 365.
- Example request: 0 of 3 points. 3 when the description quotes an example request (3–60 characters in quotation marks).
- Compatibility declared: 0 of 2 points. 2 when the frontmatter declares compatibility.
Add declarations and bundled files when they describe the skill’s actual needs. Update the source, then request a fresh review with the changed commit or PR.
hpc-runtime-doctor passes the required frontmatter check and all seven graded checks, which cover the SKILL.md format, a declared license and a commit in the last year. Those checks earn 56 of the score’s points; the rest come from description quality, instruction depth, bundled files, maintenance and curated-list citations. How the score works.
See the checks and points
| Check | Result |
|---|---|
| Frontmatter parses and declares a name and a description | Pass |
| Name uses lowercase letters, digits and hyphens, 64 characters or fewer | Pass |
| Name matches the skill's folder name | Pass |
| Description is between 50 and 1,024 characters | Pass |
| Description says when an agent should use the skill | Pass |
| SKILL.md body is 500 lines or fewer | Pass |
| A license is declared in the frontmatter or the repository | Pass |
| Repository has a commit in the last 12 months | Pass |
| Score component | Points |
|---|---|
| Structural checks | 56 of 56 |
| Description length | 5 of 5 |
| Boundary clause | 4 of 4 |
| Example request | 0 of 3 |
| Instruction depth | 7 of 7 |
| Reference files | 3 of 3 |
| Bundled scripts | 2 of 2 |
| Recent maintenance | 3 of 9 |
| Curated-list citations | 3 of 7 |
| Tool permissions declared | 2 of 2 |
| Compatibility declared | 0 of 2 |
Two badges for hpc-runtime-doctor
Choose the numeric badge, the letter badge, or both. Each links to this skill’s Suede listing; either valid linked badge can qualify for the feature offer.
[](https://skills.suedeai.ai/directory/heshamfs/materials-simulation-skills/hpc-runtime-doctor/)
[](https://skills.suedeai.ai/directory/heshamfs/materials-simulation-skills/hpc-runtime-doctor/)<a href="https://skills.suedeai.ai/directory/heshamfs/materials-simulation-skills/hpc-runtime-doctor/"><img src="https://skills.suedeai.ai/directory/heshamfs/materials-simulation-skills/hpc-runtime-doctor/score.svg" alt="Suede Skill Check: 85/100" width="160" height="175"></a>
<a href="https://skills.suedeai.ai/directory/heshamfs/materials-simulation-skills/hpc-runtime-doctor/"><img src="https://skills.suedeai.ai/directory/heshamfs/materials-simulation-skills/hpc-runtime-doctor/badge.svg" alt="Suede Skill Check: Grade B" width="160" height="175"></a>Suede Certified on the shield refers to this published structural quality check. Security scan: not scanned. Read the methodology.
Limited-time feature offer: display either the numeric or letter badge in your repository or skill README (both also qualify), then request badge verification. Eligible skills scoring 80–99 can receive a featured placement after Suede verifies at least one valid badge linked to the skill’s listing. Suede has not announced an end date.
Where this skill is cited
HeshamFS/materials-simulation-skills appears in 2 curated lists: BehiSecc/awesome-claude-skills, VoltAgent/awesome-agent-skills.